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Table 1 Discrimination scores on model benchmark suite. Average nCC-scores of three motif models on our proposed model benchmark suites; real and Markov algorithm suite, as well as real model suite.

From: Improved benchmarks for computational motif discovery

 

Algorithm suite (Real)

Algorithm suite (Markov)

Model suite (Real)

PWMs

0.89

0.90

0.48

IUPACs

0.87

0.87

0.50

MMs

0.67

0.64

0.33