Skip to main content

Table 3 7-mers identified by all methods matching the seed region of known human miRNAs

From: Identification of candidate regulatory sequences in mammalian 3' UTRs by statistical analysis of oligonucleotide distributions

AGCACAA

hsa-miR-218

CTTTGTA1

hsa-miR-524* hsa-miR-520d*

GCACTTT

hsa-miR-520d hsa-miR-93 hsa-miR-106a hsa-miR-520h

 

hsa-miR-520a hsa-miR-520e hsa-miR-519b hsa-miR-20a

 

hsa-miR-106b hsa-miR-372 hsa-miR-520b hsa-miR-17-5p

 

hsa-miR-520g hsa-miR-519c hsa-miR-519d hsa-miR-20b

 

hsa-miR-519a hsa-miR-520c hsa-miR-526b* hsa-miR-519e

GGTGCTA

hsa-miR-29c hsa-miR-29b hsa-miR-29a

GTGCAAT

hsa-miR-92b hsa-miR-367 hsa-miR-92 hsa-miR-363 hsa-miR-32

 

hsa-miR-25

GTGCCTT

hsa-miR-506 hsa-miR-124a

GTTTACA

hsa-miR-30a-5p hsa-miR-30b hsa-miR-30d hsa-miR-30e-5p hsa-miR-30c

TACTGTA

hsa-miR-101 hsa-miR-199a* hsa-miR-144

TGCAATA

hsa-miR-92b hsa-miR-92 hsa-miR-32

TGCCTTA

hsa-miR-506 hsa-miR-124a

TGTTTAC

hsa-miR-30a-5p hsa-miR-30b hsa-miR-30d hsa-miR-30e-5p

 

hsa-miR-30c

TTATATT

hsa-miR-410

TTGTATA1

hsa-miR-381

TTTGCAC

hsa-miR-19b hsa-miR-19a

  1. (1) also matches CFIm binding site