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Figure 3 | BMC Bioinformatics

Figure 3

From: A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array

Figure 3

The comparison of the performance of seven methodsavailable as R packages. Every sub-plot is based on 100 simulated chromosomes, each harboring 6 normal segments and 5 CNA segments. FASeg, aCGH, DNAcopy and GLAD were each run at 10 parameter settings; Picard, RJaCGH and BioHMM were run at default settings. The parameters used are detailed in Table 1.

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BMC Bioinformatics

ISSN: 1471-2105

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