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Table 3 Distribution of metal-binding proteins in different kingdoms and in top 10 host species of each kingdom. Not all protein sequences studied in this work are included because the host species information of some protein sequences is not yet available in the protein sequence database

From: Prediction of the functional class of metal-binding proteins from sequence derived physicochemical properties by support vector machine approach

Kingdom

Viridae

Eukaryota

Bacteria

Archaea

Number of proteins in kingdom

576

17040

13692

1618

List of top 10 species and number of proteins in each species

Bacteriophage T4 (12)

Homo sapiens (2218)

Escherichia coli (551)

Methanococcus jannaschii (203)

 

Orgyia pseudotsugata multicapsid polyhedrosis virus (10)

Mus musculus (1850)

Escherichia coli O157:H7 (264)

Methanobacterium thermoautotrophicum(103)

 

Autographa californica nuclear polyhedrosis virus (9)

Rattus norvegicus (1013)

Bacillus subtilis (250)

Methanosarcina acetivorans (93)

 

Mimivirus (9)

Arabidopsis thaliana (882)

Salmonella typhimurium (229)

Archaeoglobus fulgidus (92)

 

Variola virus (6)

Saccharomyces cerevisiae (528)

Escherichia coli O6 (212)

Methanosarcina mazei (91)

 

Vaccinia virus (strain Copenhagen) (6)

Drosophila melanogaster (455)

Haemophilus influenzae (205)

Halobacterium salinarium (75)

 

Vaccinia virus (strain Western Reserve/WR) (6)

Caenorhabditis elegans (388)

Shigella flexneri (197)

Pyrococcus horikoshii (72)

 

Vaccinia virus (strain Ankara) (6)

Bos Taurus (334)

Salmonella typhi (173)

Pyrococcus abyssi (71)

 

Ictalurid herpesvirus 1 (5)

Schizosaccharom yces pombe (314)

Mycobacterium tuberculosis (164) Synechocystis sp.

Pyrococcus furiosus (70)

 

African swine fever virus (strain BA71V) (5)

Gallus gallus (252)

(strain PCC 6803) (163)

Sulfolobus solfataricus (65)