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Figure 1 | BMC Bioinformatics

Figure 1

From: Combining comparative genomics with de novo motif discovery to identify human transcription factor DNA-binding motifs

Figure 1

The effect of (a) SMM and (b) WBMM on the size of sequence space to be searched and on the percentage of true binding sites retained for the muscle genes. Masking percentage (MP) is defined in Methods. 't/7' represents SMM and indicates that a base is retained if the base is in the non-repeat region and conserved in at least t of the 7 species (Methods). 't/7 W' indicates the corresponding WBMM.

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BMC Bioinformatics

ISSN: 1471-2105

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