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Table 1 Sequence analysis details for APD predictions

From: A Fourier Transformation based Method to Mine Peptide Space for Antimicrobial Activity

 

G|P (#)

Naa (#)

Paa (#)

HR (%)

NetC

BI (kcal/mol)

hit1

0

1

4

31

3

3.75

hit2

1

1

3

62

2

0.79

hit3

2

4

2

31

-2

-

  1. G|P is the number of Glycine|Proline residues, Naa is the number of negatively charged aminoacids, Paa is the number of positively charged aminoacids, HR is the hydrophobicity ratio, NetC is the net charge and BI is the Boman Index in kcal/mol.
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BMC Bioinformatics

ISSN: 1471-2105

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