From: Learning Interpretable SVMs for Biological Sequence Classification
Upstr. Intron | Exon | Downstr. Intron | |||
---|---|---|---|---|---|
6-mer | E-val. | 6-mer | E-val. | 6-mer | E-val. |
CTAACC | 1.2e-17 | AGTGAG | 4.2e-11 | TGTGTG | 5.9e-31 |
CCCCCC | 3.8e-11 | TTTTTT | 2.7e-09 | TTGTGT | 1.7e-24 |
TAACCC | 9.8e-10 | ATATAT | 1.3e-08 | GTGTGT | 3.6e-16 |
CACTTT | 6.2e-09 | TATATA | 3.6e-07 | GTTGTG | 4.4e-15 |
ATCCCC | 1.6e-07 | ATAGGT | 4.8e-07 | TGTTGT | 3.3e-14 |
CTTTCC | 2.4e-07 | TAGGTT | 5.0e-07 | TGCATG | 1.3e-13 |
CATTCT | 1.3e-09 | TTTAAA | 1.8e-12 | ||
CTCTCT | 1.9e-09 | AATTTT | 2.2e-10 | ||
GCATGT | 4.4e-09 | ATTTTA | 2.9e-09 | ||
GTTGTC | 4.4e-09 | CAGCAG | 1.2e-08 | ||
TCTCTA | 2.2e-08 | TAATTT | 8.3e-08 | ||
CTCTAT | 1.1e-07 | TTCCCC | 2.1e-07 |