From: Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor
Major Class | Superfamilies |
---|---|
DNA transposons | Mariner, hAT, MuDR, EnSpm, piggyback, P, Merlin, Harbinger, Transib, Novosib, Mirage, Helitron, Polinton, Rehavkus |
LTR retrotransposons | Gypsy, Copia, DIRS, BEL |
Endogenous retroviruses | ERV1, ERV2, ERV3 |
Non-LTR retrotransposons | LINE1 (L1), RTE-1, CRE, CR1 (LINE3), I, Jockey, NeSL, R2, R4, Rex1, RandI, Penelope |
Caulimoviridae | Â |
Simple repeat | Satellites (SAT, MSAT) |