Table 2 Performance of ExpressHMM and ANTM on the tiled regions of the ten chromosomes. The statistics show to what extent the two approaches make predictions in accordance with the collection of Human EST, mRNA, and known gene annotation.
From: A hidden Markov model approach for determining expression from genomic tiling micro arrays
| Â | ExpressHMM | ANTM |
|---|---|---|
Nucleotide sensitivity | 35% | 20% |
Novel nucleotides | 55% | 46% |
Nucleotide Count | 43523440 | 21190998 |
Transfrag sensitivity | 27% | 22% |
Novel transfrags | 44% | 58% |
Transfrag Count | 88604 | 170788 |
Average Length | 491.21 | 124.08 |
Median Length | 325 | 79 |