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Table 1 Performance of ExpressHMM and ANTM on the training set of probes covering RefSeq genes. The statistics show to what extent the two approaches make predictions in accordance with the RefSeq annotation. The exon/transfrag statistics refer to the sets of contiguous probes representing exons/transfrags. The splice site sensitivities refer to the single probes constituting the borders of such sets.

From: A hidden Markov model approach for determining expression from genomic tiling micro arrays

 

ExpressHMM

ANTM

Probe sensitivity

65%

44%

Novel probes predicted

65%

49%

Overlap exon Sensitivity

58%

58%

Novel transfrags predicted

27%

58%

5' Splice site sensitivity

16%

9%

3' Splice site sensitivity

16%

13%