Figure 1From: An improved map of conserved regulatory sites for Saccharomyces cerevisiaePerformance of PhyloCon, Converge, and the combined motif set on data for factors of known specificity. PhyloCon and Converge both recover more true positives than the suite of 6 programs employed in Harbison et al. Combining the results of PhyloCon and Converge significantly increases the number of true positives recovered, and eliminates false negatives, without a large adverse effect on the false positive rate. For definitions of the scoring criteria, see the Methods section.Back to article page