From: Metabolite coupling in genome-scale metabolic networks
H+ | ATP |
---|---|
H+ | ADP |
H+ | Nicotinamide adenine dinucleotide |
H+ | Nicotinamide adenine dinucleotide – reduced |
H+ | CO2 |
H+ | Nicotinamide adenine dinucleotide phosphate |
H+ | Nicotinamide adenine dinucleotide phosphate – reduced |
H2O | Phosphate |
H2O | Ammonium |
ATP | Phosphate |
ATP | ADP |
ATP | Diphosphate |
ATP | AMP |
Phosphate | ADP |
Nicotinamide adenine dinucleotide | Nicotinamide adenine dinucleotide – reduced |
Diphosphate | AMP |
Diphosphate | 5-Phospho-alpha-D-ribose 1-diphosphate |
Diphosphate | Farnesyl diphosphate |
CO2 | Malonyl-[acyl-carrier protein] |
CO2 | Acetoacetyl-ACP |
Nicotinamide adenine dinucleotide phosphate | Nicotinamide adenine dinucleotide phosphate – reduced |
Nicotinamide adenine dinucleotide phosphate | Malonyl-[acyl-carrier protein] |
Nicotinamide adenine dinucleotide phosphate | Acetoacetyl-ACP |
Pyruvate | Phosphoenolpyruvate |
Nicotinamide adenine dinucleotide phosphate – reduced | Malonyl-[acyl-carrier protein] |
Nicotinamide adenine dinucleotide phosphate – reduced | Acetoacetyl-ACP |
L-Glutamate | 2-Oxoglutarate |
L-Glutamate | L-Glutamine |
Coenzyme A | Acetyl-CoA |
Coenzyme A | Succinyl-CoA |
acyl carrier protein | Malonyl-[acyl-carrier protein] |
acyl carrier protein | Acetoacetyl-ACP |
acyl carrier protein | Myristoyl-ACP (n-C14:0ACP) |
acyl carrier protein | Hexadecenoyl-ACP (n-C16:1ACP) |
acyl carrier protein | R-3-hydroxy-myristoyl-ACP |
acyl carrier protein | Tetradecenoyl-ACP (n-C14:1ACP) |
acyl carrier protein | Octadecenoyl-ACP (n-C18:1ACP) |
acyl carrier protein | Dodecanoyl-ACP (n-C12:0ACP) |
acyl carrier protein | Palmitoyl-ACP (n-C16:0ACP) |
O2 | Hydrogen peroxide |
D-Glucose | Maltohexaose |
D-Glucose | Maltopentaose |
D-Glucose | Maltose |
D-Glucose | Maltotetraose |
D-Glucose | Maltotriose |
Ubiquinol-8 | Ubiquinone-8 |
Menaquinone 8 | Menaquinol 8 |
Succinate | Fumarate |
L-Aspartate | L-Asparagine |
CMP | CDPdiacylglycerol (E coli) |
CMP | CMP-3-deoxy-D-manno-octulosonate |
2-Demethylmenaquinone 8 | 2-Demethylmenaquinol 8 |
GTP | GDP |
Malonyl-[acyl-carrier protein] | Acetoacetyl-ACP |
Oxaloacetate | L-Malate |
Reduced thioredoxin | Oxidized thioredoxin |
Glyoxylate | Glycolate |
Flavin adenine dinucleotide oxidized | Flavin adenine dinucleotide reduced |
S-Adenosyl-L-methionine | S-Adenosyl-L-homocysteine |
tetradecanoate (n-C14:0) | Hexadecanoate (n-C16:0) |
tetradecanoate (n-C14:0) | tetradecenoate (n-C14:1) |
tetradecanoate (n-C14:0) | hexadecenoate (n-C16:1) |
tetradecanoate (n-C14:0) | octadecenoate (n-C18:1) |
Hexadecanoate (n-C16:0) | tetradecenoate (n-C14:1) |
Hexadecanoate (n-C16:0) | hexadecenoate (n-C16:1) |
Hexadecanoate (n-C16:0) | octadecenoate (n-C18:1) |
5,6,7,8-Tetrahydrofolate | 5,10-Methylenetetrahydrofolate |
5,6,7,8-Tetrahydrofolate | 10-Formyltetrahydrofolate |
tetradecenoate (n-C14:1) | hexadecenoate (n-C16:1) |
tetradecenoate (n-C14:1) | octadecenoate (n-C18:1) |
hexadecenoate (n-C16:1) | octadecenoate (n-C18:1) |
hexadecenoate (n-C16:1) | acyl-glycerophosphoglycerol (E.coli) |
octadecenoate (n-C18:1) | acyl-glycerophosphocholine |
UDPglucose | UDPgalactose |
Maltohexaose | Maltopentaose |
Maltohexaose | Maltoheptaose |
Phosphatidylglycerol (Ecoli) | acyl phosphatidylglycerol (E.coli) |
Maltopentaose | Maltotetraose |
Pyridoxal 5'-phosphate | Pyridoxamine 5'-phosphate |
Pyridoxal 5'-phosphate | Pyridoxal |
NMN | Nicotinamide |
Reduced glutathione | Glutathionylspermidine |
Reduced glutathione | (R)-S-Lactoylglutathione |
Isopentenyl diphosphate | Farnesyl diphosphate |
Isopentenyl diphosphate | Dimethylallyl diphosphate |
Isopentenyl diphosphate | Geranyl diphosphate |
D-Gluconate | 2-Dehydro-D-gluconate |
Spermidine | Glutathionylspermidine |
3-Methyl-2-oxobutanoate | L-Valine |
CMP-3-deoxy-D-manno-octulosonate | KDO-lipid IV(A) |
Trimethylamine N-oxide | trimethylamine |
Dimethyl sulfoxide | Dimethyl sulfide |
alpha,alpha'-Trehalose 6-phosphate | Trehalose |
1-Pyrroline-5-carboxylate | L-Proline |
UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine | 2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate |
acyl-glycerophosphoethanolamine (E.coli) | sn-Glycero-3-phosphoethanolamine |
acyl-glycerophosphoglycerol (E.coli) | Glycerophosphoglycerol |
Carnitinyl-CoA | crotonobetainyl-CoA |
Carnitinyl-CoA | L-Carnitine |
N-Acetyl-D-mannosamine 6-phosphate | N-Acetyl-D-mannosamine |
2-keto-4-methylthiobutyrate | 2,3-diketo-5-methylthio-1-phosphopentane |
Biotin | d-biotin d-sulfoxide |
Nitrite | Nitrate |
N1-(5-Phospho-D-ribosyl)glycinamide | N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide |
Orotate | (S)-Dihydroorotate |
4-(1-D-Ribitylamino)-5-aminouracil | 6,7-Dimethyl-8-(1-D-ribityl)lumazine |
Glycine betaine | Betaine aldehyde |
L-Glutamyl-tRNA(Glu) | tRNA (Glu) |