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Table 3 Overlap between inferred and experimental human networks

From: HomoMINT: an inferred human network based on orthology mapping of protein interactions discovered in model organisms

  

OPHID

Sanger

HEN

% overlap

LLR

  

23359

37007

28531

  

HomoMINT

9749

3501

2794

694

7.1

4.2

OPHID

23359

 

7067

1632

7.0

4.1

Sanger

37007

  

1504

4.1

3.6

Sanger H.C.

5647

  

841

14.9

5.0

HM_filtered

5203

1818

1391

453

8.7

4.4

HMINT_2int

810

290

227

218

26.9

5.7

HMINT_2org

126

70

75

60

47.6

6.6

HM_LT

543

69

63

131

24.1

5.6

  1. For this comparison we mapped all the proteins to Uniprot ids. In this process proteins (and their interactions) that could not be confidently mapped were eliminated from the networks.
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BMC Bioinformatics

ISSN: 1471-2105

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