Table 7 Manual verification of electronic GO annotation reliability on 44 proteins.
From: An evaluation of GO annotation retrieval for BioCreAtIvE and GOA
| Â | InterPro2GO | SPKW2GO | EC2GO | Grand total |
|---|---|---|---|---|
Total Proteins | 44 | 44 | 44 | 44 |
Total Proteins (+ predictions) | 29 (0.65) | 25 (0.56) | 11 (0.25) | - |
Total Proteins (- predictions) | 15 (0.34) | 19 (0.43) | 33 (0.75) | - |
No. GO terms predictions | 107 (0.63) | 53 (0.30) | 11 (0.06) | 171 |
Correct | 97 | 48 | 11 | 156 |
Incorrect | 0 | 1 | 0 | 1 |
Unknown | 10 | 4 | 0 | 14 |
Exact term | 40 | 20 | 10 | 70 |
Same lineage | 57 | 28 | 1 | 86 |
New lineage | 10 | 5 | 0 | 15 |
Precision | 0.91–1.00 | 0.91–0.98 | 1.00 | 0.91–0.99 |