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Table 8 The average RF distance of the 96-taxon alignments of sequence length 500 nt, that were analyzed in [6]. The 6000 trees were split into three groups called "slow" (0.2 substitutions per site), "moderate" (0.4 substitutions per site) and "fast" (1.0 substitutions per site). Except for STC, the accuracies for the other methods were taken from [6]. Methods are used with BNNI.

From: Shortest triplet clustering: reconstructing large phylogenies using representative sets

number sequences

NJ

BIONJ

Weighbor

HGT/FP

GME

BME

STCk = 5

96 (slow)

.173

.173

.173

.175

.173

.173

.173

96 (moderate)

.119

.118

.118

.123

.118

.118

.116

96 (fast)

.090

.090

.091

.098

.091

.090

.090