Table 3 Analysis of SwissProt keywords composition in clusters calculated for the SwissProt database
K | cases | clusters | true positive | false positive | false negative | specificity | a posteriori sensitivity | a priori sensitivity |
|---|---|---|---|---|---|---|---|---|
SPC | ||||||||
2 | 19161 | 4473 | 78782 | 4421 | 3373 | 94.7 | 95.9 | 16.1 |
6 | 79642 | 11643 | 308068 | 20598 | 261446 | 93.7 | 92.2 | 62.9 |
20 | 98276 | 6875 | 354980 | 35282 | 53628 | 91.0 | 86.9 | 72.4 |
64 | 100177 | 3953 | 331422 | 47215 | 80772 | 87.5 | 80.4 | 67.6 |
all NN | 93601 | 3601 | 308433 | 41834 | 74472 | 88.1 | 80.6 | 62.9 |
TRIBE-MCL | ||||||||
99636 | 7015 | 364554 | 36783 | 49333 | 90.8 | 88.1 | 74.4 | |
gSPC | ||||||||
6 | 80617 | 9755 | 314537 | 21080 | 23838 | 93.7 | 93.0 | 64.1 |
20 | 101805 | 2857 | 388434 | 29379 | 35042 | 93.0 | 91.7 | 79.3 |
64 | 105248 | 445 | 400100 | 31061 | 37325 | 92.8 | 91.5 | 81.6 |
all NN | 105339 | 19 | 400363 | 31142 | 37391 | 92.8 | 91.5 | 81.7 |