From: An SVM-based system for predicting protein subnuclear localizations
Method | AA | DI | TRI | D1X1 | D2X2 | D3X3 |
---|---|---|---|---|---|---|
Compartment | Accuracy % [MCC] | |||||
PML BODY | 26.3 [0.144] | 13.2 [0.091] | 0.0 [-0.045] | 31.6 [0.183] | 29.0 [0.139] | 10.5 [0.066] |
Nuclear Lamina | 40.0 [0.363] | 27.3 [0.256] | 40.0 [0.228] | 45.5 [0.340] | 41.8 [0.279] | 36.4 [0.331] |
Nuclear Splicing Speckles | 30.4 [0.326] | 32.1 [0.358] | 30.4 [0.365] | 33.9 [0.321] | 33.9 [0.316] | 33.9 [0.391] |
Chromatin | 14.8 [0.174] | 11.5 [0.106] | 13.1 [0.191] | 19.8 [0.215] | 21.3 [0.248] | 21.3 [0.271] |
Nucleoplasm | 25.3 [0.189] | 26.7 [0.207] | 12.0 [0.123] | 20.0 [0.182] | 22.7 [0.246] | 28.0 [0.229] |
Nucleolus | 78.1 [0.374] | 83.1 [0.357] | 85.8 [0.357] | 73.5 [0.357] | 72.2 [0.364] | 83.1 [0.367] |
Single-localization Overall Accuracy and MCC | 49.2 [0.262] | 49.0 [0.229] | 48.4 [0.203] | 48.4 [0.266] | 47.8 [0.265] | 51.4 [0.276] |
Multi-localization Overall Accuracy and MCC | 64.1 [0.365] | 57.6 [0.343] | 58.7 [0.182] | 60.9 [0.401] | 57.6 [0.362] | 64.1 [0.362] |