From: Phylogenetic detection of conserved gene clusters in microbial genomes
 | Phylogeny Method | Counting Method |  | ||
---|---|---|---|---|---|
Organism | Fraction | P-value | Fraction | P-value | P-value ratio a |
Aeropyrum pernix | 39/45 | 6.33E-12 | 40/46 | 2.21E-12 | 0.349 |
Aquifex aeolicus | 80/107 | 1.23E-32 | 81/111 | 8.71E-32 | 7.08 |
Bacillus subtilis | 329/503 | 1.86E-44 | 363/601 | 4.10E-38 | 2.20E+06 |
Buchnera sp. | 167/246 | 1.28E-31 | 181/307 | 1.90E-23 | 1.48E+08 |
Chlamydia trachomatis | 95/132 | 3.94E-24 | 123/295 | 1.88E-03 | 4.77E+20 |
Chlamydophia pneumoniae | 104/137 | 5.03E-30 | 135/327 | 4.29E-03 | 8.53E+26 |
Deinococcus radiodurans | 173/221 | 4.07E-57 | 167/218 | 5.56E-52 | 1.37E+05 |
Escherichia coli K12 | 439/750 | 8.92E-48 | 606/1553 | 0.19 | 2.13E+46 |
Halobacterium sp. | 127/150 | 7.60E-38 | 125/145 | 6.27E-39 | 0.0825 |
Helicobacter pylori 26695 | 120/151 | 1.11E-37 | 122/158 | 4.92E-36 | 0.443 |
Lactococcus lactis | 182/277 | 2.79E-28 | 196/319 | 4.19E-25 | 1500 |
Methanococcus janaschii | 68/83 | 5.82E-22 | 64/79 | 5.91E-20 | 102 |
Mycobacterium tuberculosis | 203/293 | 1.05E-42 | 226/347 | 1.09E-41 | 10.4 |
Mycoplasma pulmonis | 75/98 | 3.61E-11 | 77/103 | 1.44E-10 | 3.99 |
Neisseria meningitidis MC58 | 150/222 | 1.25E-51 | 156/241 | 9.14E-51 | 7.31 |