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Table 2 Summary of AVID prediction performance.

From: AVID: An integrative framework for discovering functional relationships among proteins

 

MF

BP

CC

total predicted proteins

1852

1458

2304

proteins with novel predictions (no existing GO annotation)

950

540

907

proteins with refined predictions (existing GO annotation is less detailed)

902

918

1397

accuracy of stage 3 pair-wise similarities, from 10-fold cross validation

77%

65%

78%

frequency of unannotated proteins in the correlation networks

56.4%

56.5%

70.3%

estimated success rate for AVID GO term assignment

~67%

~52%

~66%

consistency of refined predictions with existing annotation

74.7%

80.3%

86.9%