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Figure 1 | BMC Bioinformatics

Figure 1

From: Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements

Figure 1

Composition of redefined Affymetrix probe-sets based on overlap with cDNA clone insert sequence. Stacked histograms show the distribution of probe-set size for sets consisting of a single Affymetrix-defined probe-set (black) and for those comprised of probes originally grouped into separate probe-sets by Affymetrix (gray). A, NCI-60 10 k cDNA microarray to HuFL alternative CDF. B, Breast cancer 8 k cDNA microarray to HuFL alternative CDF. C, Breast cancer 8 k cDNA microarray to HG-U95Av2 alternative CDF. D, Lung cancer 22 k cDNA microarray to HG-U95Av2 alternative CDF.

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