Figure 1
From: Detailed protein sequence alignment based on Spectral Similarity Score (SSS)
Hydrophobicity Profiles generated before preprocessing for PAK4 & PAK5. Hydrophobicity profiles of the sequences of kinases PAK4 and PAK5 generated by substituting the amino acid characters with their respective property value (hydrophobicity values given in table 1). The two sequences are known to be closely similar. These profiles would subsequently be divided in equal segments and the neighborhood around the maximum peak in each segment would be converted to an orthogonal plane using Fast Fourier Transformation.