From: A universal genomic coordinate translator for comparative genomics
Source | Target | Total blocks | Direct mapped | % of Tot mapped | Melanogaster Star Configuration | Sechellia Star Configuration | Clade center configuration | |||
---|---|---|---|---|---|---|---|---|---|---|
Mapped | Ident. (%) | Mapped | Ident. (%) | Mapped | Ident. (%) | |||||
D.ana | D.ere | 52808 | 23003 | 43% | 22923 | 99.0 | 22744 | 98.3 | 22923 | 99.0 |
D.gri | 53157 | 7889 | 16% | 8498 | 96.3 | 7775 | 89.9 | 8083 | 93.5 | |
D.moj | 53000 | 8316 | 16% | 8362 | 95.9 | 7648 | 88.1 | 8122 | 93.2 | |
D.sim | 53012 | 21720 | 41% | 21975 | 98.7 | 21766 | 98.2 | 21975 | 98.7 | |
D.wil | 53435 | 8011 | 16% | 8048 | 92.8 | 8056 | 93.1 | 7424 | 86.2 | |
D.yak | 53375 | 23168 | 43% | 23065 | 98.3 | 22898 | 98.7 | 23065 | 98.3 | |
D.ere | D.gri | 61131 | 9121 | 16% | 9536 | 96.9 | 8743 | 90.6 | 8607 | 87.5 |
D.moj | 60856 | 9341 | 15% | 9238 | 96.9 | 8395 | 87.3 | 8373 | 85.9 | |
D.per | 60645 | 16423 | 27% | 16288 | 98.0 | 16296 | 97.0 | 15898 | 95.3 | |
D.pse | 61162 | 17539 | 28% | 17459 | 98.6 | 17337 | 97.2 | 17115 | 96.0 | |
D.sim | 61335 | 46231 | 76% | 46011 | 98.4 | 45936 | 98.3 | 46011 | 98.4 | |
D.vir | 60926 | 9928 | 16% | 9713 | 95.0 | 9816 | 95.6 | 9324 | 90.1 | |
D.wil | 60704 | 8628 | 14% | 8528 | 95.5 | 8535 | 95.4 | 7420 | 80.5 | |
D.yak | 61272 | 51039 | 83% | 50318 | 97.9 | 50244 | 97.8 | 50318 | 97.9 | |
D.gri | D.moj | 61933 | 22084 | 35% | 20200 | 90.8 | 18586 | 83.4 | 22109 | 98.9 |
D.per | 62029 | 8393 | 14% | 8843 | 94.7 | 8068 | 88.6 | 8160 | 88.1 | |
D.pse | 61852 | 9328 | 15% | 9325 | 94.0 | 8476 | 86.5 | 8675 | 87.6 | |
D.sim | 61844 | 8038 | 13% | 8455 | 97.7 | 7624 | 89.8 | 7701 | 88.8 | |
D.wil | 62007 | 7638 | 13% | 7380 | 88.1 | 6860 | 83.4 | 7586 | 93.4 | |
D.yak | 61729 | 8760 | 14% | 8935 | 97.5 | 8112 | 89.7 | 8180 | 88.7 | |
D.moj | D.per | 67626 | 8068 | 13% | 8403 | 94.4 | 7752 | 88.1 | 7844 | 88.8 |
D.pse | 67781 | 9001 | 13% | 8901 | 94.7 | 8141 | 87.3 | 8251 | 88.2 | |
D.sim | 67662 | 7831 | 12% | 8153 | 96.5 | 7430 | 89.7 | 7528 | 89.6 | |
D.wil | 66834 | 7462 | 12% | 7314 | 87.7 | 6870 | 84.4 | 7456 | 93.0 | |
D.yak | 67142 | 8580 | 13% | 8721 | 95.8 | 7887 | 88.9 | 8068 | 88.7 | |
D.per | D.sim | 29281 | 8133 | 28% | 8181 | 97.7 | 8093 | 97.1 | 8140 | 97.1 |
D.vir | 29314 | 5133 | 18% | 4897 | 91.9 | 4935 | 92.1 | 4871 | 91.3 | |
D.wil | 29300 | 4635 | 16% | 4420 | 89.0 | 4382 | 88.8 | 4079 | 81.8 | |
D.yak | 29451 | 8534 | 29% | 8478 | 97.6 | 8439 | 97.4 | 8403 | 96.6 | |
D.pse | D.sim | 59107 | 15465 | 27% | 15776 | 97.7 | 15596 | 97.0 | 15592 | 96.6 |
D.vir | 59041 | 9857 | 17% | 9346 | 91.8 | 9393 | 92.1 | 9249 | 90.6 | |
D.wil | 59337 | 8938 | 15% | 8582 | 90.2 | 8546 | 90.2 | 7757 | 81.8 | |
D.yak | 59277 | 16671 | 28% | 16545 | 97.6 | 16474 | 97.3 | 16387 | 96.6 | |
D.sim | D.vir | 65022 | 8855 | 14% | 8829 | 95.9 | 8867 | 93.6 | 8437 | 90.5 |
D.wil | 64973 | 7943 | 12% | 7921 | 95.3 | 7862 | 92.5 | 6864 | 80.1 | |
D.yak | 64934 | 46720 | 72% | 45819 | 97.2 | 46188 | 96.5 | 45819 | 97.2 | |
D.vir | D.yak | 63073 | 8988 | 14% | 8781 | 93.5 | 8851 | 93.6 | 8649 | 91.4 |
D.wil | D.yak | 48969 | 6204 | 13% | 5684 | 87.5 | 5748 | 87.8 | 5061 | 76.8 |
Median Mapping Ratio (%) | 97.4 | 93.6 | 91.7 |