Table 1 Summary of gene lists used in this study to validate the performance of the proposed method in comparison with existing algorithms

HeLa cells transfected with miR-1

miR-1

96 repressed genes

[35]

HeLa cells transfected with miR-124

miR-124

174 repressed genes

[35]

HeLa cells transfected with miR-373

miR-373

65 repressed genes

[35]

LNCaP cells treatedwith pre-miR-1

miR-1

88 repressed genes and 80

upregulated genes

[36]

LNCaP cells treatedwith pre-miR-206

miR-206

83 repressed genes and 62

upregulated genes

[36]

LNCaP cells treatedwith pre-miR-27b

miR-27b

51 repressed genes and 157

upregulated genes

[36]

LNCaP cells transfected with pre-miR-32

miR-32

67 repressed genes

[37]

LNCaP cells transfected with pre-miR-148a

miR-148a

79 repressed genes

[37]

Genes predicted to be targets of 11

prostate miRNAs extracted from PRedNet

miR(1, 204,

205, 143, 145,

221, 222,

27b, 133b, 31,

let-7

1854

[5, 12, 38]

Altered genes in prostate cancer using

Taylor data

480 downregulated in prostate and 51 upregulated in prostate 269 downregulated genes in PCa samples that have BCR recurrence

[39]

Genes associated with BCR event in

prostate cancer

[39]