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Figure 4 | BMC Bioinformatics

Figure 4

From: RuleBender: integrated modeling, simulation and visualization for rule-based intracellular biochemistry

Figure 4

The influence graph. Nodes represent reaction rules while arcs represent influence between rules. Green/Magenta solid arcs represent fully activation/inhibition, and Green/Magenta dash arcs represent partial activation/inhibition. Filter options that show or hide activation/inhibition are provided through pop-up menus. Two separate groups of rule nodes (group1: the first four nodes, group2: the rest of the nodes). can indicate that the model is not complete.

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