Table 1 The core genome components and lineage-specific expansions (LSEs) in five Streptomyces species.
From: Genome plasticity and systems evolution in Streptomyces
Strains | Accession ID | Genome size (Mbp) | # Genes (# ORFs) in genome | % core in genome | # LSE families | # LSE genes | % LSEs in genome | |
|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Lineage-unique | Typical LSEs | Â | Â |
S. avermitilis MA-4680 | NC_003155 (chr) NC_004719 (plasmid SAP1) | 9.1 | 7765 (7676) | 41.87 | 38 | 112 | 312 | 4.06 |
S. bingchenggensis BCW-1 | CP002047 (chr) | 11.9 | 10025 (10023) | 33.35 | 219 | 232 | 1127 | 11.24 |
S. coelicolor A3(2) | NC_003888 (chr) NC_003903 (plasmid SCP1) NC_003904 (plasmid SCP2) | 9.1 | 8300 (8153) | 39.42 | 98 | 163 | 568 | 6.97 |
S. griseus IFO 13350 | NC_010572 (chr) | 8.5 | 7224 (7136) | 44.63 | 116 | 105 | 471 | 6.60 |
S. scabiei 87-22 | NC_013929 (chr) | 10.1 | 8901 (8746) | 36.47 | 116 | 186 | 689 | 7.88 |