Skip to main content

Table 1 Relative concentrations of the 10 clones in each sample and the number of raw reads obtained in the 454 experiment.

From: Efficient error correction for next-generation sequencing of viral amplicons

 

1

2

3

4

5

6

7

8

9

10

N reads

S1

100

0

0

0

0

0

0

0

0

0

12096

S2

100

0

0

0

0

0

0

0

0

0

11134

S3

0

100

0

0

0

0

0

0

0

0

13183

S4

0

0

100

0

0

0

0

0

0

0

12080

S5

0

0

0

100

0

0

0

0

0

0

15507

S6

0

0

0

0

100

0

0

0

0

0

9643

S7

0

0

0

0

0

100

0

0

0

0

16215

S8

0

0

0

0

0

0

100

0

0

0

10583

S9

0

0

0

0

0

0

0

100

0

0

29101

S10

0

0

0

0

0

0

0

0

100

0

24230

S11

0

0

0

0

0

0

0

0

0

100

20560

S12

0

0

0

0

0

0

0

0

0

100

19133

S13

0

0

0

0

0

0

0

0

100

0

16542

S14

0

0

0

0

0

0

0

100

0

0

23629

M1

2.9

2.9

2.9

2.9

2.9

2.9

2.9

80.0

0

0

21168

M2

12.5

12.5

12.5

12.5

12.5

12.5

12.5

12.5

0

0

17577

M3

10.0

10.0

10.0

10.0

10.0

10.0

10.0

30.0

0

0

18482

M4

10.0

10.0

10.0

10.0

10.0

10.0

20.0

20.0

0

0

18722

M5

1.0

1.0

1.0

1.0

1.0

1.0

1.0

93.0

0

0

24519

M6

0.0

8.7

8.7

8.7

8.7

21.7

21.7

21.7

0

0

11561

M7

5.0

5.0

5.0

5.0

5.0

5.0

20.0

50.0

0

0

20931

M8

3.1

3.1

3.1

3.1

3.1

0.0

42.3

42.3

0

0

18733

M9

80.0

2.9

2.9

2.9

2.9

2.9

2.9

2.9

0

0

18007

M10

2.0

2.0

2.0

2.0

0.0

30.6

30.6

30.6

0

0

20677