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Table 6 Novel orthology-related complexes

From: A methodology for detecting the orthology signal in a PPI network at a functional complex level

Cluster ID

Proteins

Prediction

Cluster Group

Cluster 1

ATP1

 

OYC-E

 

ATP2

mitochondrial proton-transporting ATP synthase, catalytic core

OYC-E

 

ATP3

 

OYC-E

Cluster 2

MMS2

 

OYC-W,OYC-F,OYC-H

 

UBC13

ubiquitin conjugating enzyme complex

OYC-W,OYC-F,OYC-H

 

ERR3

 

OYC-W,OYC-F,OYC-H

Cluster 3

UBC7

 

OYC-W,OYC-F,OYC-H

 

UBC5

 

OYC-W,OYC-F,OYC-H

 

UBC6

 

OYC-W,OYC-F,OYC-H

 

UBC1

protein ubiquitination

OYC-W,OYC-F,OYC-H

 

UBC8

 

OYC-W,OYC-F,OYC-H

 

UBC4

 

OYC-W,OYC-F,OYC-H

 

VIP1

 

OYC-W,OYC-F,OYC-H

Cluster 4

SEC22

 

OYC-W,OYC-F,OYC-H

 

SFT2

 

OYC-W,OYC-F,OYC-H

 

SED5

 

OYC-W,OYC-F,OYC-H

 

BET3

 

OYC-W,OYC-F,OYC-H

 

SLY1

 

OYC-W,OYC-F,OYC-H

 

SEC17

Golgi vesicle transport, Golgi apparatus

OYC-W,OYC-F

 

SEC18

 

OYC-W,OYC-F

 

COS1

 

OYC-F,OYC-H

 

SYM2

 

OYC-F,OYC-H

 

GPA1

 

OYC-W

 

STE4

 

OYC-W

 

AKR1

 

OYC-W

 

YKT6

 

OYC-W

Cluster 5

SEC23

 

OYC-W,OYC-F,OYC-H

 

SEC24

 

OYC-W,OYC-F,OYC-H

 

SFB2

COPII vesicle coat

OYC-W,OYC-F,OYC-H

 

HIP1

 

OYC-W,OYC-F,OYC-H

 

GRH1

 

OYC-W,OYC-F

 

BUG1

 

OYC-F

Cluster 6

SEC9

 

OYC-W,OYC-H

 

SNC1

 

OYC-W,OYC-H

 

SNC2

SNARE complex, plasma membrane

OYC-W,OYC-H

 

SSO1

 

OYC-W,OYC-H

 

SSO2

 

OYC-W,OYC-H

Cluster 7

ATG5

 

OYC-F

 

ATG7

C-terminal protein lipidation

OYC-F

 

SSO2

 

OYC-F

Cluster 8

HXT3

 

OYC-E,OYC-F

 

HXT2

 

OYC-E,OYC-F

 

HXT4

 

OYC-E,OYC-F

 

HXT1

hexose transmembrane transporter activity

OYC-E,OYC-F

 

SNF3

 

OYC-E,OYC-F

 

RGT2

 

OYC-E,OYC-F

 

CYC8

 

OYC-E