Table 5 The top PTMS according to the Taxon measure
From: Surprising results on phylogenetic tree building methods based on molecular sequences
Class | Best 3 methods |
|---|---|
Actinobacteria | Probcons_InducDist_BioME ≥ Mafft_InducDist_BioME ≥ Prank_InducDist_BioME |
Archaea | Mafft_InducDist_BioNJ ≥ Mafft_InducDist_FastME ≥ Mafft_InducDist_BioME |
Firmicutes | Probcons_CodonDist_FastME ≥ Mafft_CodonDist_FastME ≥ ClustalO_CodonDist_FastME |
OtherBacteria | ClustalO_InducDist_FastME ≥ Mafft_InducDist_FastME ≥ Mafft_InducDist_BioME |
OtherEukaryota | ClustalO_InducDist_BioME ≥ ClustalO_InducDist_FastME ≥ ClustalO_InducDist_BioNJ |
Proteobacteria | Mafft_InducDist_BioME ≥ Mafft_InducDist_FastME ≥ ClustalW_InducDist_FastME |