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Table 12 Ranking and differences among empirical substitution matrices

From: Surprising results on phylogenetic tree building methods based on molecular sequences

 

Δ

n

non Metazoa

GCB ≥ WAG

-0.0005±0.0005

1068200

WAG ≫ JTT

-0.0076±0.0006

1068200

JTT > LG

-0.0007±0.0006

1068200

Metazoa

JTT ≫ WAG

-0.0116±0.0017

476904

WAG ≫ GCB

-0.0082±0.0015

476904

GCB ≫ LG

-0.0084±0.0017

476904