From: ROCS: a Reproducibility Index and Confidence Score for Interaction Proteomics Studies
Bait Experiment | ROCS Unique Prey Proteins(NB) | ROCS Unique Specific Prey Proteins(SB) | SAINT Unique Specific Prey Proteins(B) | SAINT Intersection (X) | SAINT Intersection Significance (p-value) | SAINT Semantic Similarity (simRes(c1, c2)) | ||
---|---|---|---|---|---|---|---|---|
BP | MF | CC | ||||||
STK24 | 824 | 112 | 94 | 26 | 1.49146e-05 | 1.000 | 1.000 | 0.853 |
PPM1B | 965 | 76 | 86 | 17 | 4.62432e-05 | 0.939 | 0.936 | 0.823 |
NME2 | 1349 | 260 | 210 | 47 | 1.25292e-2 | 1.000 | 1.000 | 0.937 |
CTNNBIP1 | 1229 | 69 | 161 | 8 | 1.45195e-1 | 1.000 | 0.873 | 0.937 |
VHL | 5398 | 43 | 2 | 2 | 5.08701e-05 | 0.661 | 0.442 | 0.307 |
Bait Experiment | ROCS Unique Prey Proteins(NB) | ROCS Unique Specific Prey Proteins(SB) | ComPASS Unique Specific Prey Proteins(B) | ComPASS Intersection (X) | ComPASS Intersection Significance (p -value) | ComPASS Semantic Similarity (sim Re s (c 1 , c 2 )) | ||
BP | MF | CC | ||||||
STK24 | 824 | 112 | 169 | 90 | 4.34990e-57 | 1.000 | 1.000 | 1.000 |
PPM1B | 965 | 76 | 159 | 54 | 1.07087e-31 | 1.000 | 1.000 | 1.000 |
NME2 | 1349 | 260 | 242 | 162 | 2.50264e-87 | 1.000 | 1.000 | 0.937 |
CTNNBIP1 | 1229 | 69 | 146 | 44 | 2.00480e-27 | 1.000 | 1.000 | 1.000 |
VHL | 5398 | 43 | 740 | 31 | 2.01445e-20 | 0.878 | 0.873 | 0.823 |