PMC2764847 | | Central Vote | Curated Outputa | System Raw Output Team |
---|
Gene ID
|
Gene name
|
Species
| | |
78
|
68
|
65
|
93
|
89
|
828316 | AtIscU1 | A. thaliana | 9 | Y, C | - | - | - | - | - |
829947 | AtHscA1 | A. thaliana | 8 | Y, C | - | - | - | - | - |
830529 | AtHscB | A. thaliana | 8 | Y, C | - | Y | - | Y, C | - |
852866 | Jac1 | Yeast | 8 | Y, C | Y, C | Y, C | Y, C | - | Y, C |
851084 | Ssq1 | Yeast | 8 | Y, C | Y, C | Y, C | Y, C | - | Y, C |
830818 | HscA2 | A. thaliana | 1 | Y | - | - | - | - | - |
821316 | AtIscU2 | A. thaliana | 1 | Y | - | - | - | - | - |
825719 | AtIscU3 | A. thaliana | 1 | Y | - | - | - | - | - |
| Total genes detected | 29 (manual) | 54 | 22 | 65 | 9 | 23 |
| | FP | | | 46 | 14 | 58 | 7 | 16 |
| | FN | | | 21 | 21 | 19 | 27 | 22 |
| | TP | | | 8 | 8 | 10 | 2 | 7 |
| | Precision | 0.93 (0.07)b | 0.15 | 0.36 | 0.15 | 0.22 | 0.30 |
| | Recall | 0.75 (0.16)b | 0.28 | 0.28 | 0.34 | 0.07 | 0.24 |
- There were a total of 29 gene mentions in the article (as determined independently by manual curation), but for simplicity, only the list of proposed central genes are listed here (as considered by 10 curators). The Central Vote column indicates the number of curators that selected the gene as central; “Y”: gene mentioned in the article is detected; “-”:gene mentioned was missed; “C”=indicates central gene as determined by majority vote, and in the systems it means that the gene was ranked high by the system (gene ranked higher than non central genes); “Total genes detected”: totality of gene mentions provided by a given system (what the system considered a gene). FP and FN stand for false positive and negative, respectively. aCurated output by 10 curators (2 per system). Central genes were selected by majority vote, with previous revision of discrepancies of annotation with individual UAG members. bAverage value from curators output with standard deviation shown in parenthesis.