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Table 7 The molecular descriptor value of the SAHA standard ligand and modified ligand.

From: In silico modification of suberoylanilide hydroxamic acid (SAHA) as potential inhibitor for class II histone deacetylase (HDAC)

Ligand

Molecular weight

LogP

n ON1

n OHNH2

TPSA

n rotb

Drug likeness

Drug score

SAHA

264.325

2.467

5

3

78.42

8

-8.87

0.35

1a

288.351

2.391

6

3

80.04

8

-8.5

0.36

1b

303.366

1.467

7

4

106.07

8

-10.6

0.1

1c

294.399

3.022

6

3

80.04

8

-8.17

0.35

1d

306.341

2.555

6

4

80.04

8

-9.56

0.35

1e

304.35

1.912

7

4

100.27

8

-8.3

0.36

1f

414.247

3.474

6

3

80.04

8

-8.02

0.29

2a

407.474

3.306

8

4

109.14

10

-7.4

0.26

2b

422.489

2.382

9

5

135.17

10

-9.54

0.07

2c

413.522

3.937

8

4

109.14

10

-7.12

0.25

2d

425.464

3.469

8

5

109.14

10

-8.5

0.24

2e

423.473

2.826

9

5

129.37

10

-7.23

0.27

2f

533.37

4.389

8

4

109.14

10

-6.98

0.17

  1. 1 = number of hydrogen bonds
  2. 2= number of hydrogen bond acceptors