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Table 1 Comparison of entropy and expected values for several matrices

From: A novel substitution matrix fitted to the compositional bias in Mollicutes improves the prediction of homologous relationships

matrix

entropy

expected

mean mismatch

mean match

MOLLI60

0.7126

-0.5820

-1.56

6.10

BLOSUM62

0.6979

-0.5209

-1.42

5.80

BLOSUM45

0.3795

-0.2789

-1.34

7.05