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Table 4 Statistics for yeast regenerated complexes by source database.

From: iRefR: an R package to manipulate the iRefIndex consolidated protein interaction database

database

binary interaction records

interaction records in generated complexes

generated complexes

low-throughput generated complexes

Biogrid

156860

35321

8971

6167

Mint

25358

14005

2715

1142

DIP

24810

0

0

0

IntAct

22351

932

360

267

MPACT

12395

0

0

0

BIND

9887

0

0

0

  1. BioGrid contains 156860 yeast binary interaction records of which 35321 were used to create 8971 regenerated complexes (6167 of which were derived from low-throughput interactions). No spoke-represented complexes were detected in DIP, MPACT and BIND using the method described in the main text. The numbers in the last three columns are valid for the default list of experimental methods included in iRefR, which can be modified using the package.