From: POPISK: T-cell reactivity prediction using support vector machines and string kernels
PDB ID | Sequence | Source | POPISK Score | Experimental immunogenicity* |
---|---|---|---|---|
1qrn | LLFGYAVYV | Modified Tax protein of HTLV-1 | -0.26 | - |
1qse | LLFGYPRYV | Modified Tax protein of HTLV-1 | -0.14 | + |
1qsf | LLFGYPVAV | Modified Tax protein of HTLV-1 | -0.07 | - |
1ao7 | LLFGYPVYV | Tax protein of HTLV-1 | -0.04 | + |
1oga | GILGFVFTL | Matrix protein of influenza | 1.10 | + |
2f53 | SLLMWITQC | Cancer/testis antigen 1B | 1.11 | + |
2bnq | SLLMWITQV | Modified Cancer/testis antigen 1B | 1.36 | + |