From: RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
SRA ID | Read type | Sample | RSEM | IsoEM | IsoEM (C) | Cufflinks | Cufflinks (C) | rQuant |
---|---|---|---|---|---|---|---|---|
SRX016366 | SE | HBR | 0.69 | 0.68 | 0.68 | 0.71 | 0.79 | 0.72 |
SRX003926 | SE | HBR | 0.68 | 0.67 | 0.67 | 0.7 | 0.73 | 0.71 |
SRX018974 | PE | HBR | 0.69 | 0.69 | 0.69 | 0.69 | 0.78 | NA |
SRX016368 | SE | UHR | 0.71 | 0.71 | 0.72 | 0.72 | 0.77 | 0.72 |
SRX016369 | SE | UHR | 0.73 | 0.74 | 0.74 | 0.73 | 0.76 | 0.74 |
SRX016370 | SE | UHR | 0.74 | 0.75 | 0.75 | 0.74 | 0.77 | 0.75 |
SRX016371 | SE | UHR | 0.74 | 0.75 | 0.75 | 0.74 | 0.77 | 0.75 |
SRX016372 | SE | UHR | 0.75 | 0.75 | 0.75 | 0.74 | 0.77 | 0.76 |
SRX003927 | SE | UHR | 0.72 | 0.71 | 0.72 | 0.71 | 0.74 | 0.72 |