Summary of called peaks. | ||||||
---|---|---|---|---|---|---|
Protein | Peak Caller | Mean Length | # of Peaks | % Found by T-PIC | % Found by MACS | % Found by PeakSeq |
cad | T-PIC | 990.9 | 8136 | 100 | 64.0 | 91.4 |
 | MACS | 1659.6 | 4601 | 95.7 | 100 | 99.9 |
 | PeakSeq | 5278.3 | 11612 | 38.9 | 29.1 | 100 |
gt | T-PIC | 896.1 | 4502 | 100 | 59.3 | 71.4 |
 | MACS | 1241.4 | 2929 | 85.6 | 100 | 89.3 |
 | PeakSeq | 16030.8 | 3497 | 48.4 | 38.8 | 100 |
hb1 | T-PIC | 978.5 | 7523 | 100 | 76.7 | 89.9 |
 | MACS | 1403.4 | 5640 | 93.9 | 100 | 99.9 |
 | PeakSeq | 876.3 | 12072 | 57.8 | 53.7 | 100 |
hb2 | T-PIC | 930.9 | 6392 | 100 | 75.6 | 87.4 |
 | MACS | 1321.2 | 4849 | 92.4 | 100 | 99.9 |
 | PeakSeq | 545 | 11037 | 54.5 | 52.3 | 100 |
kr1 | T-PIC | 883.0 | 11505 | 100 | 68.0 | 93.9 |
 | MACS | 1624.3 | 6490 | 98.3 | 100 | 99.9 |
 | PeakSeq | 5189.1 | 12924 | 45.9 | 33.8 | 100 |
kr2 | T-PIC | 884.0 | 11409 | 100 | 67.4 | 94.2 |
 | MACS | 1588.4 | 6393 | 98.3 | 100 | 100 |
 | PeakSeq | 5040.9 | 13540 | 43.9 | 31.5 | 100 |
FoxA1 | T-PIC | 510.7 | 17619 | 100 | 64.4 | 57.4 |
 | MACS | 394.1 | 13639 | 83.7 | 100 | 69.6 |
 | PeakSeq | 391.6 | 10320 | 97.8 | 91.1 | 100 |
STAT1 | T-PIC | 857.3 | 84465 | 100 | 36.8 | 62.5 |
 | MACS | 1342.3 | 29121 | 96.9 | 100 | 97.2 |
 | PeakSeq | 573.8 | 62124 | 86.8 | 51.5 | 100 |