Table 1 Impact of gene loss (P lo s s ) and chromosomal inversions (P inversi o n ) on the performance of QUOTA-ALIGN using the simulated genomes.
From: Screening synteny blocks in pairwise genome comparisons through integer programming
| Â | P loss = 0 | P loss = 0.3 | P loss = 0.6 | P loss = 0.9 |
|---|---|---|---|---|
P inversion = 0 | 100.0 | 100.0 | 100.0 | 100.0 |
P inversion = 0.005 | 99.6 | 99.5 | 99.3 | 98.6 |
P inversion = 0.01 | 97.9 | 97.6 | 97.2 | 94.3 |
P inversion = 0.015 | 95.5 | 94.2 | 90.9 | 89.6 |
P inversion = 0.02 | 91.3 | 89.4 | 86.6 | 80.3 |