From: Improved protein surface comparison and application to low-resolution protein structure data
 | Steps | 3DZD | CE |
---|---|---|---|
Preprocessing | Surface generation | 1.42 (seconds) | - |
 | Voxelization | 3.70 | - |
 | Computing descriptor | 7.83 | - |
Pair-wise comparison | Â | 1.46 x 10-4 | 2.66 |
PDB database scan a) | Â | 9.36 | 1 day 23 hours 36 minutes |