Table 3 CNV Length vs. Coverage Ratio vs. CNV junction identification accuracy
From: Detection and reconstruction of tandemly organized de novo copy number variations
CNV Length | Accuracy | Run Time (sec.) | ||||
|---|---|---|---|---|---|---|
| Â | C=40 | C=30 | C=20 | C=40 | C=30 | C=20 |
l ≥ 1,000,000 | 72.35% | 68.6% | 67.8% | 968.59 | 228.39 | 93.6 |
500,000 ≤ l < 1,000,000 | 79.35% | 78% | 77.5% | 189.38 | 100.25 | 60.17 |
100,000 ≤ l < 500,000 | 84.10% | 84.8% | 83.2% | 3.71 | 3.42 | 3.04 |
50,000 ≤ l < 100,000 | 82.3% | 82.3% | 88% | 0.01 | 0.01 | 0.01 |
l < 50,000 | 96.7% | 96.7% | 96.7% | 0.016 | 0.014 | 0.014 |