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Table 3 Experimental results when T s varies

From: Accurate HLA type inference using a weighted similarity graph

T s

Accuracy(%)

0.55

0.60

0.65

0.70

0.75

0.80

0.85

0.90

 

HLA-A

95.89

95.89

96.50

95.89

95.89

95.89

95.89

95.89

HLA-B

95.00

94.64

94.31

94.64

94.64

94.64

94.64

94.64

HLA-C

96.34

96.34

96.65

95.73

96.04

95.43

95.12

93.29

HLA-DRB1

83.87

83.87

83.87

83.87

83.87

83.87

83.87

83.87

HLA-DQA1

98.29

98.29

98.29

97.71

98.00

97.71

97.71

96.57

HLA-DQB1

97.14

97.43

97.43

97.14

97.14

96.86

97.14

96.86

  1. Accuracy of WSG-HI in the leave-one-out test using genotype data from the 200kb region centered at each HLA gene when the threshold T s varies from 0.55 to 0.90 and T mis = 2.
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BMC Bioinformatics

ISSN: 1471-2105

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