MBAT: A scalable informatics system for unifying digital atlasing workflows

BMC Bioinformatics

Table 6 MBAT Layer Rendering Plug-ins Feature List.

Feature	2D	2D series	3D	3D Atlas
Pan	✔	✔	✔	✔
Zoom	✔	✔	✔	✔
Rotate	✔	✔	✔	✔
Scale	✔	✔	✔	✔
Contrast	✔	✔	✔	✔
Brightness	✔	✔	✔	✔
Overlay	✔	✔	✔	✔
Opacity	✔	✔	✔	✔
Link with layers	✔	✔	✔	✔
Image coordinates under mouse	✔	✔	✔	✔
Cine images		✔	✔	✔
Orthogonal views			✔	✔
Reorient volume			✔	✔
Change color lookup table			✔	✔
Coordinate system transformation			✔	✔
Origin markers			✔	✔
Send location to search			✔	✔
Send label to search				✔
Label and group selection				✔
Set background color				✔
Mask/unmask background				✔
Multiple label sets				✔
Show active label under mouse				✔
Selected labels highlighted in graph viewer				✔
Selected labels in graph viewer highlighted				✔

Summary of the features for the core layer rendering plug-ins of 2D images, 2D image series, 3D volumes, and 3D atlases.

ISSN: 1471-2105