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Table 1 Parameter selection

From: R-Gada: a fast and flexible pipeline for copy number analysis in association studies

(higher sensitivity, higher FDR)

<-->

(a α = 0.2,T > 3)

 

<-->

(a α = 0.5,T > 4)

(lower sensitivity, lower FDR)

<-->

(a α = 0.8,T > 5)

  1. Recommended settings of a and T depending on the desired level of sensitivity and FDR.