From: TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets
 | TagCleaner | PyroTagger | RDP-Pyro | SeqTrim | SeqClean | Mothur |
---|---|---|---|---|---|---|
Web-based | Yes | Yes | Yes | Yes | - | - |
Standalone | - | Yes | - | Yes | Yes | Yes |
Trim both ends | Yes | -1 | Yes | Yes | Yes | Yes |
Provide trimming information2 | Yes | - | Yes | Yes | Yes | - |
Support IUPAC ambiguity codes | Yes | Yes | Yes | - | - | Yes |
# Allowed errors | Any | 0 | 0, 1, 2 | Any3 | Any3 | 0 |
Predict tag sequence | Yes | - | - | - | - | - |
Detect fragment- to-fragment con- catenations | Yes | - | - | - | - | - |
Continuous trimming4 | Yes | - | - | - | - | - |