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Table 3 Jobs in the Multiple alignment pipeline for 12 amniotes

From: eHive: An Artificial Intelligence workflow system for genomic analysis

Analysis

Number of jobs

Granularity

SubmitGenome

12

1 per genome

GenomeLoadExonMembers

12

1 per genome

GenomeSubmitPep

12

1 per genome

GenomeDumpFasta

12

1 per genome

CreateBlastRules

12

1 per genome

SubmitPep_*

1978219

1 per peptide

blast_*

21760409

All coding exons vs all other species

Mercator

1

1 per pipeline

Pecan

8549

1 per Mercator block

Gerp

12514

1 per Pecan alignment*

ConservationScoreHealthCheck

2

2 per pipeline

TOTAL

23759754

 
  1. This table shows the final number of jobs run for each analysis. All the SubmitPep_xxxxx and blast_yyyyy jobs have been grouped for simplicity. There are more GERP jobs than Pecan ones because alignments over 1 Mb long are split in 1 Mb segments.