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Table 3 This table represents interactions detected by the three computational models, ENFRN, BN and DBN.

From: Gene regulatory networks modelling using a dynamic evolutionary hybrid

     

Model Derived Interaction

a/a

Regulator

Target

Composite

Score

Type

ENFRN

DBN

BN

1.

FUS3

FAR1

0.35898

T

√

-

-

2.

FAR1

CLN2

0.35138

T

√

-

-

3.

SIC1

CLB5

0.53303

T

√

-

-

4.

CLB5

CLB6

0.40858

T

√

-

-

5.

CLB6

CLB5

0.53303

T

√

-

√

6.

CLN2

CLN1

0.54337

T

√

-

√

7.

CLN3

CDC28

0.34730

T

√

-

-

8.

CLN1

SIC1

0.54336

T

√

-

√

9.

CDC28

CLB6

0.41569

T

√

-

-

10.

CLB6

CDC28

0.39661

T

√

-

-

11.

CDC28

CLN1

0.54336

T

√

-

-

12.

CLN3

SWI4

0.33336

T

√

√

-

13.

CDC20

CDC28

0.49565

T

√

-

-

14.

CDC28

CLB5

0.53309

T

√

-

-

15.

SWI4

CLN1

0.38757

T

√

√

-

16.

CLN2

SIC1

-

T

-

√

-

17.

SIC1

CLN2

-

T

-

√

-

18.

CLN1

CLN2

-

T

-

√

-

19.

CLN2

CLB6

0.38983

I

√

√

-

20.

CDC20

CDC6

0.40848

I

√

√

√

21.

SIC1

CDC6

0.55806

I

√

-

-

22.

FAR1

SIC1

-

I

-

-

-

23.

FAR1

FUS3

-

I

-

√

√

24.

FUS3

CDC28

-

I

-

√

 

25.

CLN1

FAR1

-

I

-

-

√

26.

CLN1

CLB5

-

I

-

-

√

27.

CLB6

MBP1

0.37033

F

√

-

-

28.

SWI6

CLN3

0.56508

F

√

-

-

29.

FUS3

CLN3

0.57180

F

√

-

-

30.

CDC6

SIC1

-

F

-

√

-

31.

CDC6

CLB6

-

F

-

√

-

32.

CDC6

CLB5

-

F

-

√

-

33.

CDC20

FAR1

-

F

-

√

-

34.

SIC1

FAR1

-

F

-

-

√

35.

CDC6

FUS3

-

F

-

-

√

36.

FAR1

CLN3

-

F

-

-

√

37.

CLB5

MBP1

-

F

-

-

√

38.

SIC1

MBP1

-

F

-

-

√

39.

MBP1

SIC1

-

F

-

-

√

40.

CDC6

CLN3

-

F

-

-

√

  1. The 3rd column provides scores of the final trained ENFRN structure responsible for determining a specific interaction. Column 'Type' indicates whether a determined interaction is true (T), true via an intermediate gene (I) or false (F). In the last column we indicate which models detected the interaction described in columns 1 and 2.