Table 1 Number of probes and probesets during generation of CDFs
From: Analysis of DNA strand-specific differential expression with high density tiling microarrays
Sp_TMA | Sp_EMA | Sp_PCR_TMA | Sp_PCR_EMA | ||||
|---|---|---|---|---|---|---|---|
Total probes in MA | 1174792 | 120855 | |||||
Unique probes in MA (Step 1) | 1145245 | 120432 | |||||
Probes in Genome (Step 2) | 1130689 | 54022 | |||||
Unique probes in Genome (Step 3) | 1108696 | 53232 | |||||
Intragenic probes (Step 4) | 316114 | 52756 | 74418 | ||||
Probe sets (genes) in CDF (Step 5) | 4972 | 4904 | 4574 | 4574 |