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Figure 1 | BMC Bioinformatics

Figure 1

From: miRSel: Automated extraction of associations between microRNAs and genes from the biomedical literature

Figure 1

The number of miRNA and gene/protein pair matches with synonym expansion, strictness and post filters in human. No selection all miRNA-gene co-occurrences found in the publication titles and abstracts are displayed. Counts of miRNA-target pairs in the main text refer to this first column. The organism specificity can be increased by the taxonomy filter that requires confirmation of the selected organism. The text-mining results can also be restricted to miRNA gene pairs found within single sentences. The particlular type of association in miRNA-gene pairs can be restricted by the relation filter. Additional filters report pairs only if they are confirmed by target prediction algorithms (e.g. Pita) or manually curated databases (e.g. miRecords, mir2Disease, TarBase).

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BMC Bioinformatics

ISSN: 1471-2105

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