Figure 3From: AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster numberAutoSOME benchmarking. AutoSOME performance is compared to common clustering methods by clustering seven diverse benchmark datasets (see Additional file 1 for datasets and details of the entire benchmarking comparison; AutoSOME method with circular node topology is shown here). All clustering methods, apart from AutoSOME, were provided with the benchmark number of clusters for each dataset. Boxplots (created in R [56] using default boxplot parameters) represent the distribution of F-measure scores for all benchmark datasets. An F-measure score of 1 represents a perfect solution. ('+' denotes mean F-measure, and vertical bars denote median F-measure; HC = Hierarchical Clustering; PCA = Principal Components Analysis).Back to article page