Figure 1
From: Computational annotation of UTR cis-regulatory modules through Frequent Pattern Mining
Data resources used for the UTRminer generation and the processing flow. The UTRminer database integrates data of MitoRes database with: i) UTR sequences collected from the UTRef database, ii) UTR regulatory motifs extracted from the UTRsite database, including standard name, description and pattern annotation syntax. Data on species, gene name, protein function, UTRef ID reference, sequence length and base composition are extracted from the UTRef database. Gene Ontology (GO) and PFam IDs are directly collected from MitoRes through the RefSeq collection.